PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT14404
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 492aa    MW: 51404.5 Da    PI: 7.59
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT14404genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29242301159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+
  EMT14404 242 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 301
               58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-31227303IPR003657WRKY domain
SuperFamilySSF1182906.41E-27235303IPR003657WRKY domain
PROSITE profilePS5081127.772237303IPR003657WRKY domain
SMARTSM007743.0E-35242302IPR003657WRKY domain
PfamPF031064.0E-26243301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MDVAVERPPP VKEENKPDTM EIASALPMVL ESFPSTQRNS TTTSKDDKLE ATKAEMGEVR  60
EENERLKTLL SHIVRDYQSL QTHFQDAVKV KHQAPAADKL PAAPAPAPTA TTDDLVSLCL  120
GSGGYARPKG AHQRSLSSSS SGTETDPDDQ LSLGLSSRRS TDGDDRQAAR PSATPLMNLS  180
SDSSADDDAA PGHQLPAAAC PPATKARKSP GAGVDGADDE VLQQQAKKAR VSVRVKCDTP  240
TMNDGCQWRK YGQKISKGNP CPRAYYRCTV APSCPVRKQV QRCADDMSIL ITTYEGTHSH  300
PLPPAAAAMA STTSAAASML LAGSSSSSSH GHHLPFPSAG LLGPTTISTI ASCPTVTLDL  360
TAPHSLMQQQ YQSPYAAGYE SKALPAAWSS GYLAPYAGGL PYYGKSSLPA MGQHFGLGMA  420
TTRAEQLYGA AHSSSYLQRT SSVGVVHGAP AAAPAVTDTI AKAITSDPSF QSVLAAAITS  480
YMGRGAGAAA HK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20229305176WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226235KKARVSVRVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3680420.0AK368042.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2066P22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002457211.11e-172hypothetical protein SORBIDRAFT_03g003370
TrEMBLR7W9B40.0R7W9B4_AEGTA; Putative WRKY transcription factor 72
STRINGMLOC_7939.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP120812938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-60WRKY DNA-binding protein 72